eBook: Advancing Neuroscience Research - 9

Advances in tissue clearing
Advances in tissue clearing are paving the way for
more light sheet microscopy studies. " There is no
limit to the type of tissue you can image with light
sheet microscopy, as long as it is transparent, " explains
Monika Löschinger, Senior Product and Applications
Manager at Luxendo. " With clearing techniques
and light sheet microscopy, you can image
an entire clear mouse without damaging the tissue
by sectioning it, so you get a realistic 3D result for
the 3D microstructure analysis of the tissues. " She
adds that this is particularly useful in studying
brain tissue, analyzing organ development, and investigating
the formation and structure of tumors.
Light sheet microscopy is well-suited to fast, large
volume, 3D imaging in cleared whole mouse
brains or other large tissues, adds Michael Johnson,
CEO and Co-Founder of Visikol. " It is ideal for
use with large tissues that are labeled with fluorescent
proteins or small chemical dyes, as it is
very challenging to get antibodies to penetrate
deep into tissue, " he says. " Some researchers have
been able to achieve deep antibody penetration,
but it is quite challenging and tends to be expensive
and require significant method development
and validation effort. "
The final chapter in this eBook describes a protocol
to obtain images of endogenous fluorescent
protein signals from transparent mouse brains using
X-CLARITY™ systems and reagents for tissue clearing.
References
1. M. Ji, M. Arbel, L. Zhang, C. W. Freudiger, S. S. Hou, D.
Lin, X. Yang, B. J. Bacskai, X. S. Xie, Label-free imaging
of amyloid plaques in Alzheimer's disease with
stimulated Raman scattering microscopy. Sci. Adv. 4,
eaat7715 (2018).
2. Shahmoradian, S.H., Lewis, A.J., Genoud, C. et al. Lewy
pathology in Parkinson's disease consists of crowded
organelles and lipid membranes. Nat Neurosci 22,
1099-1109 (2019).
3. Tian, F., Yang, W., Mordes, D. et al. Monitoring
peripheral nerve degeneration in ALS by label-free
stimulated Raman scattering imaging. Nat Commun 7,
13283 (2016).
4. Marschallinger, J., Iram, T., Zardeneta, M. et al.
Lipid-droplet-accumulating microglia represent a
dysfunctional and proinflammatory state in the aging
brain. Nat Neurosci 23, 194-208 (2020).
5. Maeda, H., Kami, D., Maeda, R. et al. Generation
of somatic mitochondrial DNA-replaced cells for
mitochondrial dysfunction treatment. Sci Rep 11,
10897 (2021).
6. Khamo JS. et al. Optogenetic Delineation of
Receptor Tyrosine Kinase Subcircuits in PC12 Cell
Differentiation. Cell Chemical Biology, ISSN: 24519456,
Vol: 26, Issue: 3, Page: 400-410.e3.
7. Sun, C. The prevalence and specificity of local protein
synthesis during neuronal synaptic plasticity. Science
Advances. 7 (38).
8. Zhang, M., Eichhorn, S.W., Zingg, B. et al. Spatially
resolved cell atlas of the mouse primary motor cortex
by MERFISH. Nature 598, 137-143 (2021).
9. Streich, L., Boffi, J.C., Wang, L. et al. High-resolution
structural and functional deep brain imaging using
adaptive optics three-photon microscopy. Nat
Methods 18, 1253-1258 (2021).
9

eBook: Advancing Neuroscience Research

Table of Contents for the Digital Edition of eBook: Advancing Neuroscience Research

eBook: Advancing Neuroscience Research - 1
eBook: Advancing Neuroscience Research - 2
eBook: Advancing Neuroscience Research - 3
eBook: Advancing Neuroscience Research - 4
eBook: Advancing Neuroscience Research - 5
eBook: Advancing Neuroscience Research - 6
eBook: Advancing Neuroscience Research - 7
eBook: Advancing Neuroscience Research - 8
eBook: Advancing Neuroscience Research - 9
eBook: Advancing Neuroscience Research - 10
eBook: Advancing Neuroscience Research - 11
eBook: Advancing Neuroscience Research - 12
eBook: Advancing Neuroscience Research - 13
eBook: Advancing Neuroscience Research - 14
eBook: Advancing Neuroscience Research - 15
eBook: Advancing Neuroscience Research - 16
eBook: Advancing Neuroscience Research - 17
eBook: Advancing Neuroscience Research - 18
eBook: Advancing Neuroscience Research - 19
eBook: Advancing Neuroscience Research - 20
eBook: Advancing Neuroscience Research - 21
eBook: Advancing Neuroscience Research - 22
eBook: Advancing Neuroscience Research - 23
eBook: Advancing Neuroscience Research - 24
eBook: Advancing Neuroscience Research - 25
eBook: Advancing Neuroscience Research - 26
eBook: Advancing Neuroscience Research - 27
https://www.nxtbookmedia.com