Food Protection Trends - July/August 2023 - 336

TABLE 3. Most frequent antimicrobial (AMR) and virulent genes found from E. coli
isolates and potential source identification of isolates based on a literature
review of where E. coli serotypes can be found (1, 5-8, 11-13, 17, 19, 21, 23,
25, 26, 30, 32, 34-35, 37-38, 40, 44, 46-47, 50, 53, 55-57, 60, 62-63, 71,
74, 79, 81) (cont.)
AMR
Biosample ID Location
Water
Source
SAMN28816619 MO Pond D
SAMN23828803 MO Pond D
SAMN23828805 MO Pond D
SAMN23828807 MO Pond D
SAMN23828808 MO Pond D
SAMN23828814 MO Pond D
SAMN23828824 MO Pond D
SAMN23894237 MO Pond D
SAMN23894244 MO Pond D
SAMN24300391 MO Pond D
SAMN28816593
SAMN24300379
KS
KS
Serotype
O43:H2
O43:H2
O43:H2
O43:H2
O43:H2
O43:H2
O43:H2
:H2
O43:H2
O43:H2
SAMN28544843 MO Pond D O65:H38
SAMN28545094 MO Pond D O65:H38
SAMN28544964 MO Pond D O65:H38
SAMN28545100 MO Pond D O65:H38
SAMN28544963 MO Pond D O65:H38
SAMN28544841 MO Pond D O65:H38
SAMN28571030 MO Pond D O65:H38
SAMN28571026 MO Pond D O65:H38
SAMN28816613 MO Pond D O65:H38
SAMN28571033 MO Pond D
:H38
SAMN28571036 MO Pond D O65:H38
SAMN28571039 MO Pond D O65:H38
SAMN28571035 MO Pond D O65:H38
SAMN23894235 MO Pond D
Pond F
Pond H
:H21
KS
KS
SAMN28816578 MO Pond E
SAMN28545097 MO Pond D
SAMN28545096 MO Pond D
SAMN28816558 MO Pond D
SAMN28544966 MO Pond D
SAMN28545098 MO Pond D
SAMN28571027 MO Pond D
SAMN28571037 MO Pond D
SAMN28571029 MO Pond D
SAMN23828792 MO Pond C
SAMN23828809 MO Pond D
KS Cistern G
O8:H7
O8:H19
:H21
O1:H7
O1:H7
O1:H7
O1:H7
O1:H7
O1:H7
O1:H7
O1:H7
O45:H8
O3:H8
SAMN23894228 MO Pond B O149:H45
SAMN23894236 MO Pond D
SAMN28061271
:H9
:H7
SAMN28816576 MO Well M
SAMN23894221
SAMN23894222
KS
KS Cistern G
KS Cistern G
SAMN23894225 MO Pond A
SAMN23828793 MO Pond C
SAMN28816605
:H21
:H21
:H21
:H21
:H21
Pond H :H2/H47
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SAMN28816600
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VIRULENCE
POTENTIAL ANIMAL HOST
arcF
blaEC
mdtM
aph(3 " )- Ib
aph(6)-Id
tet(A)
tet(B)
gad
IpfA
terC
ompT
iss
traT
stx2
Human
Bovine
Ovine
Caprine
Porcine
Poultry
Domestic Pet
Deer
Food Protection Trends - July/August 2023

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